•  Roll of honour from Govt. College , Lahore (1964).

•  Roll of honour from Govt. College , Lahore (1965).

•  IARC senior postdoctoral award (1977).

•  Prix Isabelle De Caze De Nue , a Swiss Prize by the IARC, Lyon , France (1978) [The only Pakistani to be awarded this Prize].

•  Gold Medal by the Pakistan Academy of Sciences to Biologists under 40 years of age (1982).

•  Tamgha-i-Imtiaz by the President of Pakistan (1984).

•  Senior Fullbright Fellowship (1987-88).

•  Rockefeller Foundation's Biotechnology Career Fellow (1989-2004) [The only Pakistani to have received this honour].

•  Gold Medal by Johns Hopkins Society of Scholars and Member since 1989 [The only Pakistani to be awarded this honour].

•  Sitara-i-Imtiaz by the President of Pakistan (1994).

•  Kharazmi International Prize by Iranian Government (1997).

•  Carlos J. Finlay Prize for Microbiology by UNESCO (1997) [The only Pakistani to be awarded this International Prize].

•  Izaz-e-Kamal by the President of Pakistan (1998).

•  Hilal-i-Imtiaz by the President of Pakistan (2004).

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